STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_61800Ubiquitin-conjugating enzyme 29; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)    
Predicted Functional Partners:
Gasu_53080
E3 SUMO-protein ligase RanBP2.
   
 0.994
Gasu_39530
Small ubiquitin-related modifier 2.
   
 0.975
Gasu_10750
Small ubiquitin-related modifier.
   
 0.975
Gasu_02490
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.937
Gasu_54690
RAN GTPase-activating protein 1.
   
 0.925
Gasu_43840
Ubiquitin-like 1-activating enzyme E1 A.
  
 0.924
Gasu_35530
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.907
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.890
Gasu_41340
SP-RING-type domain-containing protein.
   
 0.841
Gasu_31280
E3 ubiquitin-protein ligase TRIP12.
    
 0.822
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.