STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_58820SMK-1 domain-containing protein. (876 aa)    
Predicted Functional Partners:
Gasu_08320
Uncharacterized protein.
   
 
 0.996
Gasu_38260
Serine/threonine-protein phosphatase.
   
 
 0.980
Gasu_32000
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.835
Gasu_39630
Transcription elongation factor SPT5.
    
   0.606
Gasu_00760
Beta-chimaerin.
    
   0.594
Gasu_50270
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.572
Gasu_02510
Hydrolase, putative.
   
 
 0.572
Gasu_39900
Serine/threonine-protein phosphatase.
   
 
 0.567
Gasu_32010
Serine/threonine-protein phosphatase.
   
 
 0.555
Gasu_01770
Serine/threonine protein phosphatase.
   
 
 0.555
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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