STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_59050Splicing factor 3B subunit 2. (614 aa)    
Predicted Functional Partners:
Gasu_47960
Splicing factor 3B subunit 4.
   
 0.999
Gasu_22700
PHD finger-like domain-containing protein 5A.
    
 0.999
Gasu_46380
Splicing factor 3B subunit 1.
   
 0.999
Gasu_26160
Splicing factor 3B subunit 5.
    
 0.999
Gasu_35570
Pre-mRNA branch site protein p14.
    
 0.998
Gasu_11010
Splicing factor 3A subunit 3 isoform 2.
   
 0.998
Gasu_60360
U2 small nuclear ribonucleoprotein A.
   
 0.997
Gasu_38900
Splicing factor 3A subunit 2.
   
 0.997
Gasu_12670
Small nuclear ribonucleoprotein B and B.
   
 0.997
Gasu_00100
Small nuclear ribonucleoprotein Sm D2.
    
 0.997
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.