STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_59260ARID/BRIGHT DNA binding domain-containing protein. (500 aa)    
Predicted Functional Partners:
Gasu_08570
SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily B member 1.
    
 
 0.830
Gasu_13360
SWI/SNF related-matrix-associated actin-dependent regulator ofchromatin subfamily C.
   
 
 0.801
Gasu_02670
Jumonji superfamily protein.
     
 0.795
Gasu_49460
SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily D.
   
 
 0.793
Gasu_20350
Retinoblastoma-associated protein.
    
 
 0.728
Gasu_30840
mRNA binding / poly(U) binding protein.
    
 
 0.721
Gasu_48060
H3/H4 histone acetyltransferase.
    
 0.662
Gasu_48070
H3/H4 histone acetyltransferase.
    
 0.662
Gasu_10650
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.656
Gasu_08740
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.656
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.