STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_58870Preprotein translocase, Oxa1 family. (331 aa)    
Predicted Functional Partners:
Gasu_03410
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.582
Gasu_55610
Translocation protein, Sec family; Belongs to the SecY/SEC61-alpha family.
   
 
 0.565
Gasu_40690
[pt] tryptophan synthase alpha chain; Belongs to the TrpA family.
   
  
 0.506
Gasu_44420
50S ribosomal protein L7/L12 (Mitochondria).
   
   0.477
Gasu_40320
[pt] small subunit ribosomal protein S9.
   
   0.454
Gasu_27430
30S ribosomal protein S9 (Mitochondrial).
   
   0.454
Gasu_17270
50S ribosomal protein L17 (Plastid); Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.441
Gasu_02280
50S ribosomal protein L17 (Mitochondrial); Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.441
Gasu_00820
30S ribosomal protein S16 (Mitochondria)l.
  
 
 0.436
atpH
[pt] F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 
 0.434
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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