STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_55080U4/U6.U5 tri-snRNP component SNU23. (204 aa)    
Predicted Functional Partners:
Gasu_30380
Microfibrillar-associated protein.
   
 0.998
Gasu_55940
Pre-mRNA-splicing factor 38A.
   
 0.989
Gasu_33450
U6 snRNA-associated Sm-like protein LSm7.
   
 0.971
Gasu_56590
Pre-mRNA-processing factor 6.
   
 0.967
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.967
Gasu_55150
Small nuclear ribonucleoprotein family protein / snRNP family protein.
   
 0.964
Gasu_54870
Elongation factor EF-2.
   
 
 0.960
Gasu_32670
Small nuclear ribonucleoprotein Sm D3.
   
   0.958
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
  0.957
Gasu_46660
U5 snRNP protein, DIM1 family.
    
 0.955
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.