STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_54260Sentrin-specific protease. (453 aa)    
Predicted Functional Partners:
Gasu_39530
Small ubiquitin-related modifier 2.
    
 0.831
Gasu_10750
Small ubiquitin-related modifier.
    
 0.831
Gasu_56030
Rad60-SLD domain-containing protein.
    
 0.831
Gasu_53310
SUMO-specific protease/ cysteine-type peptidase.
    
0.772
Gasu_48420
SUMO-specific protease/ cysteine-type peptidase.
    
 0.772
Gasu_02490
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
    
 
 0.632
Gasu_18890
Uncharacterized protein.
   
 0.607
Gasu_47060
Sentrin-specific protease.
     
 0.602
Gasu_43840
Ubiquitin-like 1-activating enzyme E1 A.
    
 
 0.577
Gasu_54690
RAN GTPase-activating protein 1.
    
 
 0.568
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.