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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_543404-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (482 aa)    
Predicted Functional Partners:
Gasu_16100
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.943
Gasu_63180
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.933
Gasu_19210
Aldehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.
  
 0.933
Gasu_48300
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 0.929
Gasu_33510
Methylmalonate-semialdehyde dehydrogenase isoform 2.
 
 
 
 0.920
Gasu_32870
Methylmalonate-semialdehyde dehydrogenase.
 
 
 
 0.920
Gasu_15760
3-hydroxyisobutyrate dehydrogenase.
     
 0.910
Gasu_04910
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
     
 0.910
Gasu_32150
Cytosolic nonspecific dipeptidase.
  
 0.908
Gasu_09660
Pantoate--beta-alanine ligase isoform 2.
     
 0.908
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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