Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_00710 | Gasu_00760 | M2Y9Z4 | M2YA01 | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Beta-chimaerin. | 0.771 |
Gasu_00710 | Gasu_16540 | M2Y9Z4 | M2X404 | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Uncharacterized protein. | 0.578 |
Gasu_00710 | Gasu_42100 | M2Y9Z4 | M2XEI9 | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.604 |
Gasu_00710 | Gasu_46430 | M2Y9Z4 | M2WV27 | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Calmodulin isoform 2; Belongs to the calmodulin family. | 0.996 |
Gasu_00710 | Gasu_54390 | M2Y9Z4 | M2XTK4 | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Acid phosphatase. | 0.694 |
Gasu_00710 | Gasu_57030 | M2Y9Z4 | M2XTD1 | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Glycerophosphoryl diester phosphodiesterase family protein isoform 1. | 0.664 |
Gasu_00760 | Gasu_00710 | M2YA01 | M2Y9Z4 | Beta-chimaerin. | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.771 |
Gasu_00760 | Gasu_16540 | M2YA01 | M2X404 | Beta-chimaerin. | Uncharacterized protein. | 0.416 |
Gasu_00760 | Gasu_46430 | M2YA01 | M2WV27 | Beta-chimaerin. | Calmodulin isoform 2; Belongs to the calmodulin family. | 0.741 |
Gasu_00760 | Gasu_54390 | M2YA01 | M2XTK4 | Beta-chimaerin. | Acid phosphatase. | 0.575 |
Gasu_00760 | Gasu_57030 | M2YA01 | M2XTD1 | Beta-chimaerin. | Glycerophosphoryl diester phosphodiesterase family protein isoform 1. | 0.605 |
Gasu_03260 | Gasu_54390 | M2Y9K4 | M2XTK4 | Serine/threonine protein kinase. | Acid phosphatase. | 0.540 |
Gasu_16540 | Gasu_00710 | M2X404 | M2Y9Z4 | Uncharacterized protein. | Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.578 |
Gasu_16540 | Gasu_00760 | M2X404 | M2YA01 | Uncharacterized protein. | Beta-chimaerin. | 0.416 |
Gasu_16540 | Gasu_46430 | M2X404 | M2WV27 | Uncharacterized protein. | Calmodulin isoform 2; Belongs to the calmodulin family. | 0.881 |
Gasu_16540 | Gasu_54390 | M2X404 | M2XTK4 | Uncharacterized protein. | Acid phosphatase. | 0.522 |
Gasu_16540 | Gasu_57030 | M2X404 | M2XTD1 | Uncharacterized protein. | Glycerophosphoryl diester phosphodiesterase family protein isoform 1. | 0.407 |
Gasu_32250 | Gasu_41260 | M2XH59 | M2VYR6 | Myo-inositol dehydrogenase; Belongs to the adaptor complexes medium subunit family. | Sortilin. | 0.653 |
Gasu_32250 | Gasu_54390 | M2XH59 | M2XTK4 | Myo-inositol dehydrogenase; Belongs to the adaptor complexes medium subunit family. | Acid phosphatase. | 0.637 |
Gasu_32250 | Gasu_57030 | M2XH59 | M2XTD1 | Myo-inositol dehydrogenase; Belongs to the adaptor complexes medium subunit family. | Glycerophosphoryl diester phosphodiesterase family protein isoform 1. | 0.545 |
page 1 of 3