STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_56690SHNi-TPR domain-containing protein. (313 aa)    
Predicted Functional Partners:
Gasu_32450
Histone acetyltransferase 1.
   
 
 0.995
Gasu_31030
Histone chaperone ASF1.
   
 
 0.983
Gasu_36550
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.967
Gasu_48060
H3/H4 histone acetyltransferase.
   
 
 0.809
Gasu_48070
H3/H4 histone acetyltransferase.
   
 
 0.809
Gasu_61570
Histone H3.
   
 
 0.791
Gasu_59640
Histone H3; Belongs to the histone H3 family.
   
 
 0.791
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.552
Gasu_20710
E3 ubiquitin-protein ligase UBR7.
   
 
 0.533
Gasu_12780
Nucleotide binding / ubiquitin-protein ligase.
      
 0.529
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.