STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_53780UBX domain-containing protein. (514 aa)    
Predicted Functional Partners:
Gasu_43460
Ubiquitin fusion degradation protein.
    
 0.999
Gasu_37220
AAA-type ATPase.
   
 0.999
Gasu_19410
AAA-type ATPase family protein / ankyrin repeat family protein.
   
 0.999
Gasu_41710
AAA-type ATPase.
   
 0.999
Gasu_40750
[pt] AAA-type ATPase family protein / ankyrin repeat family protein.
   
 0.999
Gasu_36930
AAA-type ATPase.
   
 0.999
Gasu_25990
AAA-type ATPase isoform 2.
   
 0.999
Gasu_11110
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
  0.999
Gasu_19810
Nuclear import protein NPL4-like protein.
    
 0.999
Gasu_44910
AAA-type ATPase.
   
 0.999
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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