STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_55910Alpha-L-arabinofuranosidase B. (455 aa)    
Predicted Functional Partners:
Gasu_08020
NAD-dependent epimerase/dehydratase.
     
 0.547
Gasu_09250
Cyclopropane-fatty-acyl-phospholipid synthase.
    
 
 0.493
Gasu_21710
D-arabinono-1,4-lactone oxidase.
    
 
 0.483
Gasu_32740
Phosphatidylinositol-bisphosphatase.
      
 0.478
Gasu_34570
LsmAD domain-containing protein.
      
 0.457
Gasu_53260
DnaJ homolog subfamily C member 6.
      
 0.453
Gasu_53940
Vps35 protein.
      
 0.442
Gasu_30040
RNA-binding protein.
   
  
 0.410
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.