STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_55040MI domain-containing protein. (607 aa)    
Predicted Functional Partners:
Gasu_58920
Eukaryotic translation initiation factor eIF-4A; Belongs to the DEAD box helicase family.
   
 
 0.992
Gasu_45800
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 
 0.985
Gasu_22210
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.983
Gasu_14080
Transducin family protein / WD-40 repeat family protein.
   
   0.983
Gasu_23450
Leucine zipper factor-like protein.
   
   0.981
Gasu_39750
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.977
Gasu_56760
Uncharacterized protein.
   
 
 0.976
Gasu_00800
Pre-rRNA-processing protein esf1.
   
   0.976
Gasu_02050
CBF domain-containing protein.
   
   0.975
Gasu_36440
Nucleic acid binding protein.
   
   0.974
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.