STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_55090Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (373 aa)    
Predicted Functional Partners:
Gasu_48810
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
Gasu_24420
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.965
Gasu_16070
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
0.957
Gasu_23210
2-oxoglutarate dehydrogenase E1 component.
  
 0.939
Gasu_10700
2-oxoglutarate dehydrogenase E1 component.
  
 0.939
Gasu_36460
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.867
Gasu_05180
Argininosuccinate lyase.
  
 
 0.863
Gasu_31800
Aspartate aminotransferase.
   
 0.839
Gasu_38180
Aspartate aminotransferase.
   
 0.839
Gasu_22120
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
 
 
 0.817
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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