STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_51890Exonuclease family protein. (312 aa)    
Predicted Functional Partners:
Gasu_05490
PAB-dependent poly(A)-specific ribonuclease subunit 3 isoform 2.
    
 0.933
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.790
Gasu_56900
DNA polymerase III subunit alpha.
   
 
 0.763
Gasu_25440
60S ribosomal protein L7e.
   
 0.692
Gasu_57300
Fcf2 domain-containing protein.
   
    0.666
Gasu_52150
Uncharacterized protein.
   
  0.645
Gasu_55800
Uncharacterized protein.
   
  0.645
Gasu_47930
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.642
Gasu_02590
RNA-binding protein.
    
 0.642
Gasu_17460
Brix domain-containing protein.
   
   0.635
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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