STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_54450Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (546 aa)    
Predicted Functional Partners:
Gasu_09030
Transducin family protein / WD-40 repeat family protein.
   
    0.818
Gasu_57030
Glycerophosphoryl diester phosphodiesterase family protein isoform 1.
  
 
 0.595
Gasu_03410
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.571
Gasu_53530
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
  
 0.552
Gasu_31320
Brix domain-containing protein.
   
  
 0.548
Gasu_60780
tRNA (Adenine-N1-)-methyltransferase.
   
  
 0.540
Gasu_57240
tRNA (adenine(58)-N(1))-methyltransferase.
   
  
 0.540
Gasu_39750
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
  
    0.533
Gasu_03790
U3 snoRNP component Utp13p-like protein.
   
    0.530
Gasu_44320
tRNA-splicing endonuclease subunit Sen54 isoform 2.
   
    0.530
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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