STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_53590Ubiquitin carboxyl-terminal hydrolase. (670 aa)    
Predicted Functional Partners:
Gasu_39540
50S ribosomal protein L11 (Mitochondrial); Belongs to the universal ribosomal protein uL11 family.
   
 
 0.666
Gasu_19000
Mitochondrial ribosomal protein L21.
   
 
 0.633
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.618
Gasu_00820
30S ribosomal protein S16 (Mitochondria)l.
    
 
 0.612
Gasu_49660
Oxygen-independent coproporphyrinogen III oxidase.
    
 
 0.610
Gasu_58960
40S ribosomal protein S2e.
   
 
 0.609
Gasu_61400
40S ribosomal protein S11e; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.599
Gasu_23320
50S ribosomal protein L6 (Plastid); Belongs to the universal ribosomal protein uL6 family.
   
 
 0.595
Gasu_45970
Large subunit ribosomal protein L13 isoform 2.
   
 
 0.592
Gasu_21480
50S ribosomal protein L24 (Mitochondrial).
   
 
 0.575
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.