STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_51570Transducin family protein / WD-40 repeat family protein. (527 aa)    
Predicted Functional Partners:
Gasu_15950
DNA damage-binding protein 1 isoform 2.
    
 0.925
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.905
Gasu_56970
Ubiquitin-protein ligase (Cullin); Belongs to the cullin family.
    
 0.889
Gasu_04620
Chromosome transmission fidelity protein 4.
   
  
 0.831
Gasu_58390
Cell division control protein 6.
   
  
 0.812
Gasu_35560
DNA replication factor Cdt1, putative.
   
 
 0.811
Gasu_58470
Cell division control protein 45.
   
  
 0.764
Gasu_48170
RING-box protein 1.
    
 0.757
Gasu_04470
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 
  0.724
Gasu_40950
Replication factor C subunit 3/5.
   
 0.706
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.