STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_53430WD and tetratricopeptide repeats protein 1 isoform 1. (686 aa)    
Predicted Functional Partners:
Gasu_15950
DNA damage-binding protein 1 isoform 2.
    
 0.894
Gasu_56970
Ubiquitin-protein ligase (Cullin); Belongs to the cullin family.
    
 0.686
Gasu_03600
U3 snoRNP component Sof1p.
  
  
  0.642
Gasu_14620
COP9 signalosome complex subunit 4.
    
 0.593
Gasu_39360
COP9 signalosome complex subunit 5.
    
 0.581
Gasu_48950
WD repeat-containing protein 68.
   
 
  0.577
Gasu_51570
Transducin family protein / WD-40 repeat family protein.
  
  
  0.576
Gasu_07810
COP9 signalosome complex subunit 8.
    
 0.573
Gasu_15290
Transducin family protein / WD-40 repeat family protein.
  
  
  0.572
Gasu_55670
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
  0.563
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.