STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_48070H3/H4 histone acetyltransferase. (425 aa)    
Predicted Functional Partners:
Gasu_32450
Histone acetyltransferase 1.
   
 0.939
Gasu_24890
Polycomb protein SUZ12.
    
 0.935
Gasu_06840
Histone-lysine N-methyltransferase.
    
 0.930
Gasu_36550
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.927
Gasu_28180
MYB domain transcription factor family.
    
 0.918
Gasu_15800
Chromatin binding protein isoform 2.
   
 0.899
Gasu_53930
Polycomb protein EED.
  
 0.857
Gasu_20350
Retinoblastoma-associated protein.
   
 0.852
Gasu_40920
Chromatin assembly factor 1 subunit B.
   
 
 0.833
Gasu_10650
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.829
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.