STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_47250Alkyl transferase; Belongs to the UPP synthase family. (270 aa)    
Predicted Functional Partners:
Gasu_30210
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.940
Gasu_19270
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.932
Gasu_14150
Farnesyltransferase / geranylgeranyltransferase isoform 1.
     
 0.932
Gasu_12630
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 
 0.923
Gasu_00950
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.829
Gasu_32640
Phytoene synthase.
   
 
 0.829
Gasu_48150
Ribosome recycling factor (Plastid).
  
  
 0.634
Gasu_12100
Ribosome recycling factor.
  
  
 0.634
Gasu_39770
Prolyl-tRNA synthetase.
  
    0.563
Gasu_24190
Prolyl-tRNA synthetase.
  
    0.563
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (28%) [HD]