STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_47930Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (784 aa)    
Predicted Functional Partners:
Gasu_50360
Translation initiation factor eIF-4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.921
Gasu_02590
RNA-binding protein.
     
 
0.900
Gasu_05490
PAB-dependent poly(A)-specific ribonuclease subunit 3 isoform 2.
    
 0.834
Gasu_02020
PAB-dependent poly(A)-specific ribonuclease subunit 2.
    
 0.820
Gasu_57000
Nuclear cap-binding protein subunit 2.
   
 0.816
Gasu_34570
LsmAD domain-containing protein.
   
 
 0.816
Gasu_52090
Nuclear cap-binding protein subunit 1.
    
 0.794
Gasu_16120
Molecular chaperone DnaK; Belongs to the heat shock protein 70 family.
   
 0.773
Gasu_23880
Peptide chain release factor eRF subunit 2.
   
 0.761
Gasu_37290
Polysaccharide export protein (CAP59), putative.
   
 0.743
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.