Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_01160 | Gasu_01520 | M2Y9J6 | M2XRC5 | Serine--glyoxylate transaminase. | Glycerate kinase. | 0.746 |
Gasu_01160 | Gasu_09130 | M2Y9J6 | M2Y7P8 | Serine--glyoxylate transaminase. | (S)-2-hydroxy-acid oxidase. | 0.938 |
Gasu_01160 | Gasu_11210 | M2Y9J6 | M2W7F2 | Serine--glyoxylate transaminase. | (S)-2-hydroxy-acid oxidase. | 0.938 |
Gasu_01160 | Gasu_26840 | M2Y9J6 | M2XII5 | Serine--glyoxylate transaminase. | Glycerate dehydrogenase/ poly(U) binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.972 |
Gasu_01160 | Gasu_33160 | M2Y9J6 | M2Y0E7 | Serine--glyoxylate transaminase. | (S)-2-hydroxy-acid oxidase. | 0.938 |
Gasu_01160 | Gasu_47310 | M2Y9J6 | M2XWD2 | Serine--glyoxylate transaminase. | Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.924 |
Gasu_01160 | Gasu_58490 | M2Y9J6 | M2WRR8 | Serine--glyoxylate transaminase. | (S)-2-hydroxy-acid oxidase. | 0.977 |
Gasu_01520 | Gasu_01160 | M2XRC5 | M2Y9J6 | Glycerate kinase. | Serine--glyoxylate transaminase. | 0.746 |
Gasu_01520 | Gasu_26840 | M2XRC5 | M2XII5 | Glycerate kinase. | Glycerate dehydrogenase/ poly(U) binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.966 |
Gasu_01520 | Gasu_47310 | M2XRC5 | M2XWD2 | Glycerate kinase. | Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.910 |
Gasu_01520 | Gasu_58490 | M2XRC5 | M2WRR8 | Glycerate kinase. | (S)-2-hydroxy-acid oxidase. | 0.652 |
Gasu_09130 | Gasu_01160 | M2Y7P8 | M2Y9J6 | (S)-2-hydroxy-acid oxidase. | Serine--glyoxylate transaminase. | 0.938 |
Gasu_09130 | Gasu_11210 | M2Y7P8 | M2W7F2 | (S)-2-hydroxy-acid oxidase. | (S)-2-hydroxy-acid oxidase. | 0.901 |
Gasu_09130 | Gasu_26840 | M2Y7P8 | M2XII5 | (S)-2-hydroxy-acid oxidase. | Glycerate dehydrogenase/ poly(U) binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.925 |
Gasu_09130 | Gasu_33160 | M2Y7P8 | M2Y0E7 | (S)-2-hydroxy-acid oxidase. | (S)-2-hydroxy-acid oxidase. | 0.906 |
Gasu_09130 | Gasu_39450 | M2Y7P8 | M2XY41 | (S)-2-hydroxy-acid oxidase. | 4-nitrophenyl phosphatase. | 0.910 |
Gasu_09130 | Gasu_47310 | M2Y7P8 | M2XWD2 | (S)-2-hydroxy-acid oxidase. | Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.925 |
Gasu_09130 | Gasu_58490 | M2Y7P8 | M2WRR8 | (S)-2-hydroxy-acid oxidase. | (S)-2-hydroxy-acid oxidase. | 0.901 |
Gasu_09680 | Gasu_47310 | M2W7V3 | M2XWD2 | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.910 |
Gasu_09680 | Gasu_49880 | M2W7V3 | M2WU10 | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | Lactoylglutathione lyase. | 0.902 |
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