STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_44300Calcium-binding EF hand family protein isoform 2. (787 aa)    
Predicted Functional Partners:
Gasu_58960
40S ribosomal protein S2e.
    
   0.443
Gasu_16370
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
   0.440
Gasu_18680
40S ribosomal protein S15A; Belongs to the universal ribosomal protein uS8 family.
    
   0.440
Gasu_61400
40S ribosomal protein S11e; Belongs to the universal ribosomal protein uS17 family.
    
   0.440
Gasu_49660
Oxygen-independent coproporphyrinogen III oxidase.
    
   0.440
Gasu_32330
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.431
Gasu_18810
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.430
Gasu_34490
60S ribosomal protein L8e.
    
 
 0.430
Gasu_36380
60S ribosomal protein L17e; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.422
Gasu_52570
40S ribosomal protein S13e; Belongs to the universal ribosomal protein uS15 family.
   
   0.415
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.