STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_42970Photosystem I subunit O. (149 aa)    
Predicted Functional Partners:
psaD
[pt] photosystem I subunit II.
   
 
 0.993
psaF
[pt] photosystem I subunit III.
   
 
 0.988
psaB
Photosystem I P700 chlorophyll a apoprotein A2; Belongs to the PsaA/PsaB family.
    
 
 0.809
PsaA
[pt] photosystem I P700 chlorophyll A apoprotein.
    
 
 0.809
Gasu_37550
Light-harvesting complex protein.
   
 
 0.670
Gasu_11630
Light-harvesting complex protein.
   
 
 0.670
Gasu_58900
Rab family, other.
   
 
 0.670
Gasu_50670
Phosphatase / phosphoprotein phosphatase / protein tyrosine phosphatase.
   
   0.651
Gasu_40670
[pt] photosystem I subunit XI.
   
   0.651
Gasu_64510
Tyrosine specific protein phosphatase family protein.
   
   0.651
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.