STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_45990Histone demethylase JARID1. (739 aa)    
Predicted Functional Partners:
Gasu_47570
F-type H+-transporting ATPase subunit delta.
  
 0.971
Gasu_52880
F-type H+-transporting ATPase subunit delta.
  
 0.966
Gasu_40610
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 0.964
Gasu_06840
Histone-lysine N-methyltransferase.
   
 0.954
Gasu_24890
Polycomb protein SUZ12.
    
 0.939
Gasu_61570
Histone H3.
   
 0.908
Gasu_59640
Histone H3; Belongs to the histone H3 family.
   
 0.908
Gasu_04200
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.899
Gasu_13250
F-type H+-transporting ATPase subunit gamma.
  
 0.899
Gasu_14490
F-type H+-transporting ATPase subunit gamma.
  
 0.899
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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