STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_44060Double-stranded DNA-binding family protein. (114 aa)    
Predicted Functional Partners:
Gasu_25970
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.885
Gasu_20930
40S ribosomal protein S19e.
  
    0.870
Gasu_61400
40S ribosomal protein S11e; Belongs to the universal ribosomal protein uS17 family.
   
    0.860
Gasu_04730
60S ribosomal protein L30e.
   
    0.846
Gasu_19580
Elongation factor EF-1 beta subunit; Belongs to the EF-1-beta/EF-1-delta family.
   
    0.845
Gasu_07620
60S ribosomal protein L35.
   
    0.845
Gasu_36510
40S ribosomal protein S3e; Belongs to the universal ribosomal protein uS3 family.
   
    0.844
Gasu_19110
60S ribosomal protein L34e.
   
    0.844
Gasu_24720
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
    0.833
Gasu_06940
60S ribosomal protein L23Ae; Belongs to the universal ribosomal protein uL23 family.
   
    0.818
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.