Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_02580 | Gasu_08480 | M2XQH2 | M2W8A4 | DNA repair protein isoform 1; Belongs to the RecA family. | ATP-dependent RNA helicase-like protein. | 0.912 |
Gasu_02580 | Gasu_19150 | M2XQH2 | M2Y4N6 | DNA repair protein isoform 1; Belongs to the RecA family. | Crossover junction endonuclease MUS81 isoform 2. | 0.782 |
Gasu_02580 | Gasu_21050 | M2XQH2 | M2W4G8 | DNA repair protein isoform 1; Belongs to the RecA family. | Breast cancer 2 susceptibility protein. | 0.928 |
Gasu_02580 | Gasu_26690 | M2XQH2 | M2XIH5 | DNA repair protein isoform 1; Belongs to the RecA family. | DNA repair and recombination protein RAD52. | 0.812 |
Gasu_02580 | Gasu_31840 | M2XQH2 | M2WZ68 | DNA repair protein isoform 1; Belongs to the RecA family. | DNA-repair protein XRCC3. | 0.996 |
Gasu_02580 | Gasu_33170 | M2XQH2 | M2WZ15 | DNA repair protein isoform 1; Belongs to the RecA family. | Uncharacterized protein. | 0.950 |
Gasu_02580 | Gasu_42740 | M2XQH2 | M2XXV9 | DNA repair protein isoform 1; Belongs to the RecA family. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.935 |
Gasu_02580 | Gasu_48760 | M2XQH2 | M2VWF8 | DNA repair protein isoform 1; Belongs to the RecA family. | DNA helicase II / ATP-dependent DNA helicase PcrA. | 0.785 |
Gasu_02580 | Gasu_54170 | M2XQH2 | M2XTI4 | DNA repair protein isoform 1; Belongs to the RecA family. | Exonuclease 1. | 0.831 |
Gasu_02580 | Gasu_60930 | M2XQH2 | M2XRH2 | DNA repair protein isoform 1; Belongs to the RecA family. | Replication protein A subunit. | 0.821 |
Gasu_08480 | Gasu_02580 | M2W8A4 | M2XQH2 | ATP-dependent RNA helicase-like protein. | DNA repair protein isoform 1; Belongs to the RecA family. | 0.912 |
Gasu_08480 | Gasu_19150 | M2W8A4 | M2Y4N6 | ATP-dependent RNA helicase-like protein. | Crossover junction endonuclease MUS81 isoform 2. | 0.999 |
Gasu_08480 | Gasu_21050 | M2W8A4 | M2W4G8 | ATP-dependent RNA helicase-like protein. | Breast cancer 2 susceptibility protein. | 0.718 |
Gasu_08480 | Gasu_26690 | M2W8A4 | M2XIH5 | ATP-dependent RNA helicase-like protein. | DNA repair and recombination protein RAD52. | 0.997 |
Gasu_08480 | Gasu_31840 | M2W8A4 | M2WZ68 | ATP-dependent RNA helicase-like protein. | DNA-repair protein XRCC3. | 0.912 |
Gasu_08480 | Gasu_33170 | M2W8A4 | M2WZ15 | ATP-dependent RNA helicase-like protein. | Uncharacterized protein. | 0.725 |
Gasu_08480 | Gasu_42740 | M2W8A4 | M2XXV9 | ATP-dependent RNA helicase-like protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.998 |
Gasu_08480 | Gasu_48760 | M2W8A4 | M2VWF8 | ATP-dependent RNA helicase-like protein. | DNA helicase II / ATP-dependent DNA helicase PcrA. | 0.997 |
Gasu_08480 | Gasu_54170 | M2W8A4 | M2XTI4 | ATP-dependent RNA helicase-like protein. | Exonuclease 1. | 0.852 |
Gasu_08480 | Gasu_60930 | M2W8A4 | M2XRH2 | ATP-dependent RNA helicase-like protein. | Replication protein A subunit. | 0.999 |
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