STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_36950BRCA1-associated protein / zinc finger family protein isoform 2. (565 aa)    
Predicted Functional Partners:
Gasu_13790
Ubiquitin.
 
  
 0.918
Gasu_10140
Ubiquitin.
 
   
  0.847
Gasu_52970
Ubiquitin.
 
  
 0.836
Gasu_49630
40S ribosomal protein S27Ae.
    
  0.599
Gasu_66020
Ubiquitin-like domain-containing protein.
    
  0.599
Gasu_37740
Small GTP-binding protein of Ras family.
    
  0.577
Gasu_49350
Small GTP-binding protein of Ras family.
    
  0.577
Gasu_17740
PI3K/PI4K domain-containing protein.
    
 0.561
Gasu_44250
Serine/threonine protein kinase.
     
  0.512
Gasu_35280
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
      
 0.483
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.