STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_3513060S ribosomal protein L13e. (209 aa)    
Predicted Functional Partners:
Gasu_57260
60S ribosomal protein L1e.
   
 0.999
Gasu_57470
60S ribosomal protein L6e.
   
 0.999
Gasu_55280
WD_REPEATS_REGION domain-containing protein.
   
 
 0.999
Gasu_54520
60S ribosomal protein L26e.
   
 0.999
Gasu_53510
40S ribosomal protein S27.
   
 
 0.999
Gasu_52020
40S ribosomal protein S16e; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
Gasu_49690
60S ribosomal protein L44e; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.999
Gasu_46480
60S ribosomal protein L18e.
   
 0.999
Gasu_43860
60S ribosomal protein L35Ae isoform 1.
   
 0.999
Gasu_29040
60S ribosomal protein L21e.
   
 0.999
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.