STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_32870Methylmalonate-semialdehyde dehydrogenase. (486 aa)    
Predicted Functional Partners:
Gasu_55920
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.931
Gasu_15760
3-hydroxyisobutyrate dehydrogenase.
   
 0.931
Gasu_26380
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.931
Gasu_04910
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
 
 0.931
Gasu_28740
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
 0.927
Gasu_63180
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
0.921
Gasu_50940
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.921
Gasu_21670
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.921
Gasu_19210
Aldehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.
   
0.921
Gasu_54040
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.920
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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