STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_32110Interferon-related developmental (IFRD) regulator family protein isoform 2. (449 aa)    
Predicted Functional Partners:
Gasu_05120
Ubiquitin-protein ligase.
    
  0.939
Gasu_11430
Ubiquitin-protein ligase isoform 2.
    
  0.939
Gasu_10140
Ubiquitin.
    
  0.884
Gasu_49630
40S ribosomal protein S27Ae.
    
  0.786
Gasu_66020
Ubiquitin-like domain-containing protein.
    
  0.786
Gasu_34490
60S ribosomal protein L8e.
    
 
 0.786
Gasu_61420
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
 
 0.765
Gasu_34220
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.763
Gasu_52020
40S ribosomal protein S16e; Belongs to the universal ribosomal protein uS9 family.
    
   0.762
Gasu_18810
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.762
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.