STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_30180NAD dependent epimerase/dehydratase family protein. (325 aa)    
Predicted Functional Partners:
Gasu_18730
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.708
Gasu_49340
40S ribosomal protein S15e; Belongs to the universal ribosomal protein uS19 family.
   
  0.689
Gasu_49660
Oxygen-independent coproporphyrinogen III oxidase.
   
 0.688
Gasu_36510
40S ribosomal protein S3e; Belongs to the universal ribosomal protein uS3 family.
   
 0.686
Gasu_61400
40S ribosomal protein S11e; Belongs to the universal ribosomal protein uS17 family.
   
 0.678
Gasu_35280
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.675
Gasu_24720
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.667
Gasu_54530
40S ribosomal protein S1e.
   
 0.664
Gasu_18680
40S ribosomal protein S15A; Belongs to the universal ribosomal protein uS8 family.
   
 0.663
Gasu_53580
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.658
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.