STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_30280Protein YIPF. (209 aa)    
Predicted Functional Partners:
Gasu_46710
ER to Golgi transport protein Yif1.
   
 
 0.908
Gasu_43560
Sorting and assembly machinery component 50.
 
      0.899
Gasu_52120
Protein YIPF.
   
 
 0.826
Gasu_52720
Protein YIPF.
   
 
 0.582
Gasu_38460
D-lactate dehydrogenase (Cytochrome).
 
    
 0.575
Gasu_37550
Light-harvesting complex protein.
    
 
 0.572
Gasu_11630
Light-harvesting complex protein.
    
 
 0.572
Gasu_58900
Rab family, other.
    
 
 0.572
Gasu_42620
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
 
    
 0.552
Gasu_28030
Myeloid/lymphoid or mixed-lineage leukemia protein 3.
   
 
 0.500
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.