STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_27670Transducin family protein / WD-40 repeat family protein. (420 aa)    
Predicted Functional Partners:
Gasu_09030
Transducin family protein / WD-40 repeat family protein.
   
 
 0.992
Gasu_17460
Brix domain-containing protein.
   
    0.985
Gasu_12890
Uncharacterized protein.
   
 
 0.983
Gasu_56110
Uncharacterized protein.
   
  
 0.980
Gasu_47210
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.980
Gasu_45790
ATP-dependent RNA helicase.
   
 
 0.978
Gasu_18230
RNA-binding protein.
   
  
 0.977
Gasu_31320
Brix domain-containing protein.
   
  
 0.974
Gasu_66130
Putative essential nucleolar protein required for biogenesis of the 60S ribosomal subunit.
   
    0.971
Gasu_26820
U3 small nucleolar RNA-associated protein 7.
   
    0.964
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.