STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_26480Cytochrome c-type biogenesis protein CcmE. (293 aa)    
Predicted Functional Partners:
ccsA
Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
  
 
 0.990
Gasu_02710
Cytochrome c-type biogenesis protein.
  
  
 0.678
Gasu_58560
Ferrochelatase; Belongs to the ferrochelatase family.
      
 0.560
Gasu_52210
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
      
 0.558
Gasu_29980
Phosphoribosylglycinamide formyltransferase.
  
  
 0.495
Gasu_14530
NADH dehydrogenase (Ubiquinone) flavoprotein 2.
      
 0.485
Gasu_42050
NADH dehydrogenase (Ubiquinone) Fe-S protein 8.
     
 0.479
Gasu_27220
NADH dehydrogenase (Ubiquinone) Fe-S protein 2; Belongs to the complex I 49 kDa subunit family.
      
 0.478
Gasu_20110
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
      
 0.444
Gasu_60740
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
      
 0.441
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.