STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_23880Peptide chain release factor eRF subunit 2. (548 aa)    
Predicted Functional Partners:
Gasu_36620
Peptide chain release factor eRF subunit 1.
   
 0.999
Gasu_42650
Adenylyl-sulfate kinase.
 
  
   0.905
Gasu_47460
ABC transporter, sub-family E, substrate-binding protein.
   
 
 0.824
Gasu_46190
Endonuclease.
    
 0.775
Gasu_12550
Dynamin GTPase.
    
 0.775
Gasu_36510
40S ribosomal protein S3e; Belongs to the universal ribosomal protein uS3 family.
   
 0.774
Gasu_47930
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.761
Gasu_02590
RNA-binding protein.
   
 0.761
Gasu_41310
Methyltransferase.
    
 0.754
Gasu_20870
Uncharacterized protein.
   
 
 0.748
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.