STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_25050RNA-binding protein. (713 aa)    
Predicted Functional Partners:
Gasu_09100
Bms1-type G domain-containing protein.
   
 
 0.995
Gasu_05750
Transducin family protein / WD-40 repeat family protein.
   
 
 0.988
Gasu_41360
Brix domain-containing protein.
   
   0.985
Gasu_02760
FtsJ-like methyltransferase family protein.
   
   0.954
Gasu_45790
ATP-dependent RNA helicase.
   
   0.947
Gasu_23050
Uncharacterized protein.
   
 
 0.942
Gasu_43980
rRNA biogenesis protein rrp5.
   
   0.935
Gasu_45800
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 
 0.928
Gasu_54470
WD_REPEATS_REGION domain-containing protein.
   
  
 0.917
Gasu_13710
Nucleolar protein pescadillo.
   
  
 0.904
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.