STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_24190Prolyl-tRNA synthetase. (706 aa)    
Predicted Functional Partners:
Gasu_19620
Methionyl-tRNA synthetase isoform 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
Gasu_17440
Methionine--tRNA ligase-like protein.
  
 0.999
Gasu_32390
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.984
Gasu_18280
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.980
Gasu_38250
Isoleucyl-tRNA synthetase isoform 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.937
Gasu_39770
Prolyl-tRNA synthetase.
  
  
 
0.908
Gasu_48650
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.902
Gasu_01930
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.869
Gasu_29370
Beta-carotene 15,15-dioxygenase, putative isoform 2.
  
 0.859
Gasu_20800
Asparaginyl-tRNA synthetase isoform 2.
  
 0.850
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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