STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_22960Septum formation protein. (215 aa)    
Predicted Functional Partners:
Gasu_17400
O-methyltransferase.
 
    
 0.883
Gasu_36390
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
    
   0.777
Gasu_12830
RNA methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
    0.570
Gasu_32650
Folylpolyglutamate synthase.
  
  
 0.515
Gasu_16470
GTP-binding protein HflX.
   
  
 0.502
Gasu_64990
O-methyltransferase.
     
 0.465
Gasu_57340
Cytochrome P450 isoform 1; Belongs to the cytochrome P450 family.
      
 0.430
Gasu_09240
Cyclopropane-fatty-acyl-phospholipid synthase.
      
 0.430
Gasu_37130
Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
  
 0.421
Gasu_25250
Translation initiation factor IF-1.
  
  
 0.421
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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