STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_21720CCR4-NOT transcription complex subunit 4. (695 aa)    
Predicted Functional Partners:
Gasu_59290
CCR4-NOT transcription complex subunit 9.
    
 0.999
Gasu_19750
CCR4-NOT transcription complex subunit 7/8.
    
 0.998
Gasu_10450
CCR4-NOT transcription complex subunit 1.
    
 0.995
Gasu_41300
CCR4-NOT transcription complex subunit 2 isoform 2.
    
 0.990
Gasu_16160
CCR4-NOT transcription complex subunit 3.
   
 0.988
Gasu_41650
ATP-dependent RNA helicase.
    
 
 0.965
Gasu_08270
Exosome complex component RRP42.
    
   0.959
Gasu_14270
CCR4-NOT transcription complex subunit 1.
     
 0.943
Gasu_48800
Uncharacterized protein.
     
 0.938
Gasu_57930
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
    
 0.843
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.