STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_19730D-threo-aldose 1-dehydrogenase. (320 aa)    
Predicted Functional Partners:
Gasu_46960
Inositol-phosphate phosphatase.
   
 
 0.915
Gasu_21710
D-arabinono-1,4-lactone oxidase.
      
 0.835
Gasu_60030
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
 
    
 0.599
Gasu_28270
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.499
Gasu_47860
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
      
 0.473
Gasu_20610
Nucleoporin family protein.
    
 0.464
Gasu_20750
Uncharacterized protein.
    
 0.464
Gasu_50890
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.460
Gasu_43180
Uncharacterized protein.
    
 0.460
Gasu_27720
Transducin family protein / WD-40 repeat family protein; Belongs to the WD repeat SEC13 family.
    
 0.448
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.