STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_17050Vacuolar protein sorting protein DigA. (979 aa)    
Predicted Functional Partners:
Gasu_25330
Vacuolar protein sorting 11-like protein.
   
 0.997
Gasu_04380
Vacuolar protein sorting protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.997
Gasu_04890
Vacuolar assembly protein Vps41.
    
 0.997
Gasu_53100
Vacuolar protein sorting vps16, putative; Belongs to the VPS16 family.
   
 0.997
Gasu_50230
Rab family, other.
   
 
 0.981
Gasu_62380
Syntaxin isoform 1; Belongs to the syntaxin family.
    
 
 0.950
Gasu_35580
Syntaxin 6.
    
 
 0.885
Gasu_38530
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.758
Gasu_17570
Uncharacterized protein.
   
  
 0.492
Gasu_53940
Vps35 protein.
   
  
 0.491
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.