STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_15570D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (550 aa)    
Predicted Functional Partners:
Gasu_39840
Phosphoserine aminotransferase.
 
   
  0.980
Gasu_01520
Glycerate kinase.
     
 0.908
Gasu_01690
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.901
Gasu_11390
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 
0.900
Gasu_26000
Anthranilate synthase component II.
     
 0.528
Gasu_33750
Indole-3-glycerol phosphate synthase.
     
 0.528
Gasu_45520
Bifunctional aspartate kinase/homoserine dehydrogenase 1.
  
 
 0.430
Gasu_36380
60S ribosomal protein L17e; Belongs to the universal ribosomal protein uL22 family.
 
  
 
 0.430
Gasu_20140
Phosphoribulokinase.
  
  0.406
Gasu_11170
Uridine kinase; Belongs to the uridine kinase family.
  
  0.406
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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