STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_12550Dynamin GTPase. (1012 aa)    
Predicted Functional Partners:
Gasu_25980
RNA-binding protein.
   
 0.926
Gasu_31370
RRM domain-containing protein.
    
 0.914
Gasu_50390
RNA-binding protein 8A isoform 2.
    
 0.783
Gasu_23880
Peptide chain release factor eRF subunit 2.
    
 0.775
Gasu_52090
Nuclear cap-binding protein subunit 1.
    
 0.772
Gasu_57000
Nuclear cap-binding protein subunit 2.
   
 0.769
Gasu_04870
M7G(5')pppN diphosphatase.
    
 0.766
Gasu_29450
RNA-binding protein.
    
 0.700
Gasu_58920
Eukaryotic translation initiation factor eIF-4A; Belongs to the DEAD box helicase family.
 
  
 0.681
Gasu_36620
Peptide chain release factor eRF subunit 1.
   
 0.674
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.