STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_09490Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (549 aa)    
Predicted Functional Partners:
Gasu_53470
Propionyl-CoA carboxylase beta chain.
 
 0.980
Gasu_53890
3-methylcrotonyl-CoA carboxylase beta subunit isoform 2.
 
 0.980
Gasu_00730
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.961
Gasu_40720
[pt] acetyl-CoA carboxylase carboxyltransferase subunit beta.
 0.953
Gasu_48120
2-isopropylmalate synthase.
  
 
 0.948
Gasu_09880
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.948
Gasu_55920
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.935
Gasu_26380
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.935
Gasu_33530
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.918
Gasu_57350
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.918
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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