STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_07260E3 ubiquitin-protein ligase synoviolin isoform 1. (470 aa)    
Predicted Functional Partners:
Gasu_10270
PRKCSH domain-containing protein.
   
 0.907
Gasu_58360
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.779
Gasu_21850
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.779
Gasu_54800
UBX domain-containing protein.
    
 
 0.731
Gasu_07210
RNA-binding protein NOB1 isoform 2.
 
      0.715
Gasu_20420
Uncharacterized protein.
    
 0.704
Gasu_21840
Sel1 domain protein repeat-containing protein.
    
 0.704
Gasu_18040
Uncharacterized protein.
    
 0.704
Gasu_12640
Nucleotide excision repair protein.
    
 0.679
Gasu_37220
AAA-type ATPase.
    
 0.628
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.