STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_11520Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)    
Predicted Functional Partners:
Gasu_10510
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.997
Gasu_36600
Uncharacterized protein.
    
 0.961
Gasu_11500
E3 ubiquitin-protein ligase RAD18.
    
 0.935
Gasu_18910
E3 ubiquitin protein ligase.
    
 0.912
Gasu_42920
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.903
Gasu_41850
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.902
Gasu_31280
E3 ubiquitin-protein ligase TRIP12.
    
 0.862
Gasu_56560
Ubiquitin-conjugating enzyme E2 variant.
   
0.840
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.791
Gasu_10140
Ubiquitin.
   
 0.767
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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