STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_08950mRNA splicing factor (ISS). (371 aa)    
Predicted Functional Partners:
Gasu_24380
Pre-mRNA-processing factor 8.
    
 
 0.996
Gasu_54870
Elongation factor EF-2.
    
 
 0.935
Gasu_27840
GYF domain-containing protein.
   
 
 0.734
Gasu_34230
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
    
 
 0.709
Gasu_38140
ATP-dependent RNA helicase.
    
 
 0.701
Gasu_02060
Translocation protein, Sec family.
    
 
 0.701
Gasu_20840
HIT zinc finger family protein.
    
 
 0.606
Gasu_21970
ATP-dependent RNA helicase.
    
 
 0.561
Gasu_12670
Small nuclear ribonucleoprotein B and B.
    
 
 0.531
Gasu_63370
Elongation factor EF-2.
    
 
 0.522
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.