STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_05450ATP-dependent Clp protease proteolytic subunit. (275 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK; Acts as a chaperone.
   
 
 0.722
Gasu_29840
Triosephosphate isomerase.
  
  
 0.715
Gasu_47610
ATP-dependent Clp protease ATP-binding subunit ClpX.
 
 
 0.695
Gasu_44710
ATP-dependent HslUV protease ATP-binding subunit HslU.
 
 
 0.695
Gasu_09010
ATP-dependent HslUV protease, peptidase subunit HslV isoform 1.
  
 
 0.695
psbA
Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
   
 
 0.639
Gasu_29620
Light-harvesting complex protein.
      
 0.594
Gasu_55830
ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family.
  
 
 0.566
Gasu_66230
ATPase, AAA family.
  
 
 0.566
Gasu_03700
ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family.
  
 
 0.566
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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